Based on published genetic data in conjunction with species sequences we generated, we created a Geneious Prime sequence alignment to analyse how many base pair polymorphisms existed between each of 10 co-occurring Buprestid species in the primer and probe regions we designed for our EAB COI qPCR assay (highlighted in grey). The sequences listed are consensus sequences based on a combination of those we generated ourselves as well as those accessed on GenBank.

 
 
  Part of: Kyle KE, Allen MC, Siegert NW, Grabosky J, Lockwood JL (2024) Design of an eDNA sampling method for detection of an endophagous forest pest. NeoBiota 95: 149-164. https://doi.org/10.3897/neobiota.95.118267