Research Article |
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Corresponding author: Tomasz Rewicz ( tomasz.rewicz@biol.uni.lodz.pl ) Academic editor: Adam Petrusek
© 2025 Tomasz Rewicz, Andrea Desiderato, Jennie Barthel Svedén, Karolina Bacela-Spychalska, Tomasz Mamos, Ulf Bjelke.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Rewicz T, Desiderato A, Svedén JB, Bacela-Spychalska K, Mamos T, Bjelke U (2025) Ponto-Caspian amphipods (Crustacea, Amphipoda) and their microsporidian parasites recently established in Sweden. NeoBiota 101: 243-275. https://doi.org/10.3897/neobiota.101.153292
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The invasive amphipods Dikerogammarus villosus, D. haemobaphes and Pontogammarus robustoides, which originate from the Ponto-Caspian region, are amongst Europe’s most ecologically disruptive amphipods and have recently been detected in Sweden, marking their northernmost record and indicating a concerning expansion of their range. This study employed DNA barcoding to confirm the species identifications, assess population structure and trace the origins of these recently introduced populations. To improve the detection resolution in the case of D. villosus, we designed specific primers targeting two additional mitochondrial markers at genes ND5 and ATP8, enabling precise identification of the probable source populations, based on known European invasion routes and their phylogeographic structure. Our analysis identified the Western Group of D. villosus as being present in Sweden, with a probable introduction from the large lakes in the foothills of the Alps, possibly via sailing boats that were transported overland. Meanwhile, P. robustoides and D. haemobaphes appear to have invaded from the eastern and southern Baltic regions — including the Baltic States, Vistula Lagoon and Szczecin Lagoon — possibly via ballast water, ship hulls or floating debris. Additionally, we detected microsporidian infections in all three species, identifying Dictyocoela muelleri and D. berillonum as associated parasites. Given the ecological risks posed by these invasive species, coordinated monitoring, particularly along the Baltic coast, is essential for enabling rapid response efforts in the Nordic region.
Dikerogammarus haemobaphes, Dikerogammarus villosus, mitochondrial marker, Pontogammarus robustoides, range expansion, source of introduction
Freshwater ecosystems are invaluable, harbouring about 6% of global species despite covering only 0.01% of Earth’s water resources and 0.80% of its surface (
Invasive alien species receive considerable attention in Scandinavia and Northern Europe. In that region, freshwater ecosystems are relatively young, having developed over the past 10,000–15,000 years, following the retreat of the last ice sheet (
Amphipods may be harmful invasive species due to their potential to outnumber native invertebrate species, leading to a decline in native biodiversity (
Amongst invasive Ponto-Caspian amphipods, D. villosus, D. haemobaphes and P. robustoides are the most successful invaders, which have colonised the majority of the main inland waterbodies of Europe within less than 30 years (
All three species are known to be the hosts of a variety of microsporidian parasites (
Molecular methods, such as DNA barcoding and environmental DNA (eDNA) analyses, provide precise tools for the accurate identification and detection of freshwater invasive species, including various amphipod taxa (
Recent studies have provided mitochondrial genomes (
This study aims to: a) use DNA barcoding to assess the genetic diversity of the recently established invasive amphipods D. villosus, D. haemobaphes and P. robustoides in Sweden; b) design primers for variable mitochondrial markers to determine the source populations of the killer shrimp D. villosus; c) investigate whether populations of D. villosus, D. haemobaphes and P. robustoides are infected by microsporidian parasites, which are common hitchhikers during invasion and assess their potential impact on the host invasion process.
The littoral invertebrate fauna of Swedish lakes and streams was surveyed through environmental monitoring programmes and the three species included in this study were discovered via these surveys and shared via online repositories. The initial discovery of D. villosus in Sweden (
Freshly sampled material of gammarids for molecular studies was obtained through kick-sampling with a benthic hand-net. Subsequently, the amphipods were preserved in 96% ethanol and later identified in the laboratory to the species level. Individuals of D. villosus were collected in Lake Vättern (58.290°N, 14.643°E) on 24 February 2023 by Ulf Bjelke. Individuals of D. haemobaphes were collected in Lake Tullingesjön, close to Stockholm (59.221°N, 17.877°E) on 28 April 2023 by Jennie Barthel Svedén and Joakim Pansar. Individuals of P. robustoides were collected in Lake Mälaren, close to Stockholm (59.504°N, 17.789°E) on 28 October 2023 by Ulf Bjelke.
To test for the source populations of these individuals, the additional samples of the three species coming from native and invaded range collected during different sampling campaigns spanning from 2013 to 2019 (Fig.
Geographic distribution of sequenced individuals analysed in this study. New data (triangles) and public database sequences (circles) are shown for Dikerogammarus villosus (black), D. haemobaphes (yellow) and Pontogammarus robustoides (blue). The locations of the Swedish records used in this study are encircled. Further details can be found from Suppl. material
Samples were processed either in the Canadian Centre for DNA Barcoding (CCDB), Guelph, Canada or in the Department of Invertebrate Zoology and Hydrobiology, University of Lodz (UniLodz) (see Suppl. material
The Barcode Index Number (BIN;
As
The first marker is located in the gene coding for the NADH-ubiquinone oxidoreductase chain five protein (ND5, 5047 bp to 5990 bp of the complete mitochondrial genome, GenBank accession number: OK173836). To amplify it, newly-designed primers: ND5DvF (forward; 5'-GATGTAGCTATTTTATTAAGG-3') and ND5DvR (reverse; 5'-TTCCTCCCAACAATGTCAC-3') were used. The second marker (position 1994 bp to 2864 bp of OK173836) encompassed fragments of the cytochrome c oxidase subunit II (COX2, 397 bp), full sequences of genes for tRNA-Lys, tRNA-Asp, an ATP synthase membrane subunit 8 (ATP8) and partial sequence of the gene coding ATP synthase membrane subunit 6 (ATP6; 307 bp). For the amplification of this region, the newlydesigned primers: C2ATPDvF (forward; 5'-CCTTTTGGAGACTGATAACAG-3'), C2ATPDvR (reverse; 5'-CAAGTGAGAGTGTAAAAATTAAC-3') were used. The PCR conditions were as follows: an initial denaturing step at 94 °C for 3 min was followed by 35 cycles of 94 °C for 20 s, 47 °C for 45 s and 72 °C for 1 min, with a final extension at 72 °C for 2 min. Primers were checked for their specificity for D. villosus against other gammarids, using mitogenomes available from
The newly-obtained sequences of amphipods were edited, aligned with MUSCLE (
The haplotype relationship was visualised through Median-Joining Networks (MJN) using PopART (
The genetic diversity of the studied markers and taxa was evaluated by determining haplotype count (k) and haplotypic diversity (h), following the methodology proposed by
To evaluate the differences between the studied molecular markers and between the two invasion routes (comprising the native range) of D. villosus and the Swedish population, an analysis of molecular variance (AMOVA) was conducted with 10,100 permutations on each gene with Arlequin v.3.5.2.2 (
Specimens of D. villosus, D. haemobaphes, and P. robustoides from Sweden were tested for the presence of microsporidian intracellular parasites. Microsporidian DNA was co-extracted together with the host DNA and amplification of microsporidian partial 16S rDNA was performed via PCR using microsporidia — specific primers V1f (forward) and 530r (reverse) (
The obtained sequences were checked with a BLAST search (
Extensive sampling campaigns, conducted by the local authorities after the initial findings of D. villosus in Lake Vättern, showed its presence at 26 sites (
We used a COI mtDNA barcoding marker and confirmed the morphological identification of D. villosus. Thirty-two individuals collected in Sweden were assigned to BIN BOLD:AAI9938, which contains all known European individuals of D. villosus. Twenty-six individuals of D. haemobaphes were assigned to BIN BOLD:AEO1330, the most widespread and invasive lineage occurring in Europe. All 30 individuals of P. robustoides were assigned to BIN BOLD:AAB7665, which is currently the only known BIN grouping COI sequences of this species.
Newly-designed primers for ATP8 and ND5 markers were amplified from all individuals from Sweden and also for selected reference samples from Poland and Ukraine (Suppl. material
Median-joining haplotype networks showing relationships between haplotypes for the three studied amphipod species. A. Dikerogammarus villosus, based on concatenated ATP8 and ND5 dataset; B. Dikerogammarus haemobaphes, based on COI dataset; C. Pontogammarus robustoides, based on COI dataset. Each bar represents a single mutational step, with small black dots indicating undetected intermediate haplotype states. Circle sizes are proportionate to haplotype frequencies, as illustrated by the open circles with accompanying numbers. In all panels, colours represent individuals from different geographic regions. Dashed lines in B encircle distinct Barcode Index Numbers (BINs) indicated by their respective codes.
Comparison of the discriminatory power of newly-designed markers for the molecular groups, based on 94 D. villosus reference sequences from the native and invaded range.
| length [bp] | variable sites | Hd | H | |
|---|---|---|---|---|
| COI | 605 | 6 | 0.250 | 1/6 |
| ND5 | 855 | 16 | 0.612 | 1/11 |
| ATP8 | 758 | 13 | 0.752 | 1/10 |
| ND5+ATP8 | 1613 | 29 | 0.785 | 0/16 |
| ND5+ATP8+COI | 2218 | 35 | 0.790 | 0/18 |
The analysis of molecular variance indicated distinct patterns of spatial variation across the mitochondrial genes examined (COI, ATP8 and ND5; Table
Results of the analyses of molecular variance (AMOVA). The results marked in bold are significant (p-value < 0.05) after 10,100 permutations. Gene: mitochondrial DNA marker; Source of variation: how genetic diversity is partitioned (Amongst groups, Amongst populations within groups, Within populations); d.f.: degrees of freedom; Sum of squares: measure of total variation; Variance components: estimated genetic variance attributable to each source; Percentage of variation: proportion of total genetic variation explained by each source; Fixation Index: F-statistics (FST: overall genetic differentiation; FCT: differentiation amongst groups; FSC: differentiation amongst populations within groups).
| Gene | Source of variation | d.f. | Sum of squares | Variance components | Percentage of variation | P-value | Fixation Index |
|---|---|---|---|---|---|---|---|
| COI | Amongst groups | 2 | 1.154 | 0.015 | 11.7 | 0.002 | FST: 0.117 |
| Within groups | 91 | 10.495 | 0.115 | 88.3 | |||
| Total | 93 | 11.649 | 0.131 | ||||
| Amongst groups | 2 | 1.154 | -0.008 | -6.1 | 0.572 | FCT: -0.061 | |
| Amongst populations within groups | 6 | 2.661 | 0.046 | 35.4 | 0.005 | FSC: 0.333 | |
| Within populations | 85 | 7.834 | 0.092 | 70.8 | 0.000 | FST: 0.293 | |
| Total | 93 | 11.649 | 0.130 | ||||
| ATP8 | Amongst groups | 2 | 16.418 | 0.264 | 56.5 | 0.000 | FST: 0.565 |
| Within groups | 91 | 18.561 | 0.204 | 43.5 | |||
| Total | 93 | 34.979 | 0.468 | ||||
| Amongst groups | 2 | 16.418 | 0.224 | 47.8 | 0.003 | FCT: 0.478 | |
| Amongst populations within groups | 6 | 4.687 | 0.081 | 17.3 | 0.000 | FSC: 0.332 | |
| Within populations | 85 | 13.874 | 0.163 | 34.9 | 0.000 | FST: 0.651 | |
| Total | 93 | 34.979 | 0.468 | ||||
| ND5 | Amongst groups | 2 | 18.209 | 0.297 | 72.5 | 0.000 | FST: 0.725 |
| Within groups | 91 | 10.249 | 0.113 | 27.5 | |||
| Total | 93 | 28.457 | 0.410 | ||||
| Amongst groups | 2 | 18.209 | 0.274 | 66.9 | 0.030 | FCT: 0.669 | |
| Amongst populations within groups | 6 | 2.606 | 0.046 | 11.1 | 0.002 | FSC: 0.336 | |
| Within populations | 85 | 7.643 | 0.090 | 22.0 | 0.000 | FST: 0.780 | |
| Total | 93 | 28.457 | 0.409 |
The pairwise FST values differed markedly amongst the studied genes. While FST values for ATP8 were consistently high (> 0.77) in all comparisons with the Swedish population, the patterns for ND5 were more variable. Specifically, a high FST of ~ 0.90 was observed between the Swedish and Eastern Groups, whereas the value was considerably lower (~ 0.30) for the Western Group (Suppl. material
Our dataset for D. haemobaphes consisted of 649 COI sequences (179 newly generated in this study; see Suppl. materials
To reveal the potential source population for Pontogammarus robustoides in Sweden, we used the COI dataset consisting of 201 sequences (30 from Sweden, see Suppl. material
Amongst 32 individuals of D. villosus, 26 individuals of D. haemobaphes and 30 individuals of P. robustoides that were screened for microsporidia presence, we detected one, 25 and five infected individuals, respectively (Suppl. material
Fourteen of the D. muelleri sequences obtained in this study were identical to those already found in D. haemobaphes, but from its native range in Ukraine (
Bayesian phylogenetic reconstruction of Dictyocoela spp., based on fragments containing SSU, ITS and partial LSU genes. For parasite sequences, the labels include the GenBank accession number and the abbreviation of the host species name (see below). Sequences representing haplotypes from this study are indicated in bold and with a star; sequences from the Ponto-Caspian hosts are indicated in blue. pp: Bayesian Posterior Probability. Host species: Cgar – Cryptorchestia garbini, Cisc – Chaetogammarus ischnus, Ddes – Deshayesorchestia deshayesii (= Talorchestia deshayesi), Dhae – Dikerogammarus haemobaphes, Dvil – Dikerogammarus villosus, Dsp. – Diporeia sp., Eber – Echinogammarus berilloni, Gaeq – Gammarus aequicauda, Gbal – Gammarus balcanicus, Gduedue – Gammarus duebeni duebeni, Gduecel – Gammarus duebeni celticus, Gfos – Gammarus fossarum, Groe – Gammarus roeselli, Gvar – Gammarus varsoviensis, Mawa – Melita awa, Mmin – Marteilia minutus, Ogam – Orchestia gammarellus, Omor – Osmerus mordax, Pflu – Paracalliope fluviatilis, Psp. – Paraleptamphopidae sp., Prob – Pontogammarus robustoides, Smaj – Spirogammarus major.
Invasive Ponto-Caspian amphipods are steadily spreading into new water-bodies and watersheds across Europe (
Dikerogammarus villosus, commonly known as the “killer shrimp”, is expanding its range in Europe and has recently successfully colonised the Masurian Lakes in Poland (
DNA barcoding of the Swedish population revealed the presence of only a single haplotype, the most common one found across Europe (Suppl. material
The most probable introduction pathway for D. villosus into Lake Vättern is via fishing boats transported from Lake Constance in recent years (U. Bjelke, personal communication). Extensive sampling conducted in 2023 (Fig.
Dikerogammarus haemobaphes, a prominent Ponto-Caspian invader, has expanded its range along the Eastern Baltic coast in recent years, with a newly-recorded location in Riga Bay (
DNA barcoding and phylogeographic studies of D. haemobaphes (
The high dispersal capacities of invasive Ponto-Caspian amphipods have facilitated their successful colonisation of Europe (
Pontogammarus robustoides, another successful invasive amphipod of Ponto-Caspian origin, has expanded its European range in recent years, with new records from Estonia (
Despite its widespread invasion, a comprehensive phylogeographic study of P. robustoides in its non-native range is still lacking. Studies of mitochondrial COI data from
Swedish individuals were assigned to two haplotypes: one dominant in the Baltic Region and Dnieper and a second, newly-identified haplotype clustering with others from the same area (Fig.
Traditionally, research on invasive species has focused on species-level characteristics to identify traits associated with invasiveness and predict potentially invasive species (
Additionally, an admixture of the Western and Eastern Groups is possible, forming intraspecific hybrids. This scenario has been found to be plausible in Poland, where a gap of no more than 50 km wide in the Notecki Canal separates the two groups (T. Rewicz, A. Desiderato, unpublished data). Given the connectivity of waterbodies and the invader dispersal abilities in Sweden, similar scenarios cannot be excluded. The Eastern Group currently occupies coastal areas of the south-eastern Baltic (
The impact of invasive parasites on ecosystems can be as harmful as that of their invasive hosts (
Interestingly, the two horizontally transmitted Cucumispora dikerogammari and C. ornata, which are specific to Dikerogammarus spp. (
It is worth mentioning some limitations of the detection method used in this study. Co-infection by different microsporidian species within a single host individual is not uncommon and can hinder successful sequencing. This was the most probable reason for the failed sequencing attempts in three D. haemobaphes individuals that were identified as infected. Advances in sequencing technologies, such as the use of high-throughput platforms like Oxford Nanopore, may help overcome these limitations. Parallel sequencing of all present strains within a sample could significantly increase the accuracy and reliability of microsporidian detection.
Dikerogammarus spp. and P. robustoides can spread within Sweden, as their fast dispersal amongst other lake systems is well-documented (
Using DNA barcoding, our study has demonstrated that Sweden’s freshwater ecosystems have been invaded by three ecologically damaging invasive species: Dikerogammarus villosus, D. haemobaphes and P. robustoides. Data from mtDNA markers suggests that all three species were probably introduced during single events with a limited number of individuals, indicated by the reduced molecular diversity within populations, but using two different vectors, recreational boats and shipping from the Baltic. Newly-designed molecular markers identified the Western Group as the source population for D. villosus in Sweden. Additionally, haplotype distribution and dispersal potential of D. haemobaphes and P. robustoides suggest eastern or southern Baltic Regions, such as the Baltic States, Vistula Lagoon and Szczecin Lagoon, as the sources from which these species were introduced to Sweden. All the species were found to be carriers of microsporidian parasites, which may pose an additional threat to Nordic ecosystems. Finally, our study contributes to the understanding of biological invasions at the population level. This fine scale is becoming invaluable for developing effective conservation strategies. Moreover, coordinated monitoring efforts, particularly along the Baltic coast, may be key to enabling a rapid response to new invasive species in Swedish waters.
We would like to thank Michał Grabowski, Alicja Konopacka, Remi Wattier, Krzysztof Podwysocki, Łukasz Trębicki and Joakim Pansar for their support with field sampling and Julita Nawrocka for her assistance with laboratory work.
The authors have declared that no competing interests exist.
No ethical statement was reported.
No use of AI was reported.
This study was partially supported by the National Science Centre (Poland), projects number 2018/31/D/NZ8/03061; 2017/01/X/NZ8/01086; the Polish Ministry of Science and Higher Education grant N N304 350139; and internal funds from the University of Lodz. Tomasz Rewicz received additional support through a Scholarship from the Polish National Agency for Academic Exchange (NAWA) under the Bekker Program (project number PPN/BEK/2018/1/00162/U/00001).
Conceptualization: TR, KBS, AD, UB. Data curation: TR, TM, KBS. Formal analysis: TR, AD, KBS, TM. Funding acquisition: TR. Investigation: TR. Methodology: TR, TM, KBS, AD. Project administration: TR. Resources: JBS, TM, UB. Software: AD, TM. Supervision: TR, UB. Validation: TR, KBS. Visualization: TR, KBS, JBS. Writing - original draft: TR, TM, AD, KBS. Writing - review and editing: TR, JBS, AD, KBS, UB, TM.
Tomasz Rewicz https://orcid.org/0000-0002-2085-4973
Andrea Desiderato https://orcid.org/0000-0003-3284-5529
Karolina Bacela-Spychalska https://orcid.org/0000-0003-4498-5107
Tomasz Mamos https://orcid.org/0000-0002-0524-3015
All of the data that support the findings of this study are available in the main text or Supplementary Information.
Sampling localities for three Ponto-Caspian amphipods used in this study
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Sample overview, microsporidia presence, collection sites, dates and GenBank accession numbers
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Microsporidia overview, host species, literaturę reference, sequence length, GenBank accession numbers
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Localities of recorded invasive Ponto-Caspian Crustacea in Sweden
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Conventional F-Statistics from haplotype frequencies of the different genes (COI, ATP8, and ND5)
Data type: xlsx
Explanation note: The Fst values are calculated between regions and between populations.
Median-joining networks showing the relationships between Dikerogammarus villosus haplotypes
Data type: jpg
Explanation note: Based on A: concatenated ND5, ATP8 and COI markers and B: COI only. Colours indicate D. villosus individuals representing different areas of origin. Each bar corresponds to a substitution, with the small black dot in A denoting undetected or extinct intermediate haplotype state. The sizes of the circles are proportionate to the frequencies of haplotypes in the dataset, as illustrated by the open circles with accompanying numbers.
Known distribution of the invasive Ponto-Caspian Crustacea in Sweden
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Explanation note: Data valid for October 2024.