Research Article |
Corresponding author: Tara D. Gariepy ( tara.gariepy@agr.gc.ca ) Academic editor: Jianghua Sun
© 2021 Tara D. Gariepy, Dmitry L. Musolin, Aleksandra Konjević, Natalia N. Karpun, Vilena Y. Zakharchenko, Elena N. Zhuravleva, Luciana Tavella, Allison Bruin, Tim Haye.
This is an open access article distributed under the terms of the CC0 Public Domain Dedication.
Citation:
Gariepy TD, Musolin DL, Konjević A, Karpun NN, Zakharchenko VY, Zhuravleva EN, Tavella L, Bruin A, Haye T (2021) Diversity and distribution of cytochrome oxidase I (COI) haplotypes of the brown marmorated stink bug, Halyomorpha halys Stål (Hemiptera, Pentatomidae), along the eastern front of its invasive range in Eurasia. NeoBiota 68: 53-77. https://doi.org/10.3897/neobiota.68.68915
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The arrival, establishment and pest status of Halyomorpha halys in Europe and non-native countries in Asia have been well-documented, with thorough characterisation of the genetic diversity and occurrence of cytochrome oxidase I (COI) haplotypes in Switzerland, France, Hungary, Italy and Greece. However, a number of gaps exist in terms of the characterisation of the haplotype diversity and occurrence of H. halys along the invasion front that covers eastern Europe, western and central Asia. To contribute towards filling this gap, the COI haplotype diversity and distribution were investigated for H. halys collected in Serbia, Ukraine, Russia, Georgia and Kazakhstan. A total of 646 specimens were analysed and five haplotypes were found (H1, H3, H8, H33 and H80). Haplotype H1 was present in all five countries investigated and was the only haplotype detected amongst > 500 specimens collected from Ukraine, Russia and Georgia. H1 (82%) was the dominant haplotype found in Kazakhstan, alongside H3 (18%). In contrast to the low or no diversity observed in these four countries, Serbia had higher haplotype diversity and was represented by five haplotypes. Although H3 was dominant (47%) in Serbia, H1 was also prevalent (40%); the remaining haplotypes (H8, H33 and H80) were minor contributors (1–11%) to the haplotype composition. The results are discussed in context with other known populations in neighbouring countries and patterns of haplotype diversity indicate the movement of successful invasive populations in Europe to generate secondary invasions along the eastern front of the invasion in Eurasia. Possible scenarios regarding the spread of particular haplotypes in these regions are discussed, along with suggestions for future research to fill existing gaps.
Agricultural pest, DNA barcoding, haplotype, Heteroptera, invasive alien species, mtDNA, range expansion, secondary invasion
Halyomorpha halys Stål (Hemiptera: Pentatomidae) is native to East Asia [China (including Taiwan), Japan, Korea, Myanmar and Vietnam;
The arrival and establishment of H. halys in Europe and non-native areas of Asia has been well-documented (see timeline in Table
Timeline of the establishment of Halyomorpha halys in invaded areas of Eurasia, including western Europe, southern Europe, eastern Europe, western Asia, and central Asia.
Year | Country | Geographical region* | Reference |
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2004 | Liechtenstein | western Europe |
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2007 | Switzerland | western Europe |
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2011 | Belgium | western Europe |
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Germany | western Europe |
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Greece | southern Europe |
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2012 | France | western Europe |
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Italy | southern Europe |
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2013 | Russia | eastern Europe |
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2014 | Hungary | eastern Europe |
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2015 | Austria | western Europe |
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Serbia | southern Europe |
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Romania | eastern Europe |
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Georgia and Abkhazia | western Asia |
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2016 | Bulgaria | eastern Europe |
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Kazakhstan | central Asia |
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Slovakia | eastern Europe |
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Spain | southern Europe | ||
Ukraine | eastern Europe |
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2017 | Azerbaijan | western Asia |
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Croatia | southern Europe |
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Slovenia | southern Europe |
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Turkey | western Asia |
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2018 | Albania | southern Europe |
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Bosnia and Herzegovina | southern Europe |
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Czech Republic | eastern Europe |
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Malta | southern Europe |
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Poland | eastern Europe |
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Portugal | southern Europe |
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2019 | Moldova | eastern Europe |
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North Macedonia | southern Europe |
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Mitochondrial DNA sequence data have frequently been used to trace the origin and spread of invasive insect species (
Halyomorpha halys COI haplotypes have been reported from Austria, Croatia, France, Georgia, Greece, Hungary, Italy, Romania, Serbia, Slovenia, Switzerland and Turkey (
Halyomorpha halys adults were field-collected (by sweep net, hand-picking from vegetation or in pheromone traps) between 2016 and 2019 from locations with recently-established populations in Georgia (including Abkhazia; 2016–2018; n = 293), Kazakhstan (2017; n = 11), Russia (2016, 2018, 2019; n = 202), Serbia (2018; n = 129) and Ukraine (2017; n = 11) (Fig.
As described by
PCRs were performed in a 25 µl volume containing 0.125 µl of Taq Platinum, 2.5 µl of 10× PCR buffer, 1.25 µl of 50 mM MgCl2, 0.125 µl of 10 µM dNTPs (Invitrogen, Carlsbad, CA, USA), 0.25 µl of 10 µM forward and reverse primer (respectively), 19.5 µl ddH20 and 1 µl of template DNA. A 658-bp sequence of the mitochondrial gene Cytochrome C oxidase subunit I (COI) was amplified by PCR using primers LCO1490 and HCO2198 (
PCR products were visualised with a QIAxcel Advanced automated capillary electrophoresis system (Qiagen, Hilden, Germany) using the DNA screening cartridge and method AL320. Results were scored with QIAXCEL SCREENGEL Software (version 1.2.0) and only those samples of the expected fragment size with a signal strength exceeding 0.1 relative fluorescent units were scored as positive.
Samples, scored as positive, were purified using ExoSAP-IT (Affymetrix, Santa Clara, CA, USA), following the manufacturer’s instructions. Purified PCR products were bidirectionally sequenced on an ABI 3730 DNA Analyser at the Robarts Research Institute (London Regional Genomics Centre, ON, Canada). Forward and reverse sequences were assembled and edited using CODONCODE ALIGNER, version 9.0.1 (Codon-Code Corporation, Centreville, MA, USA). Sequence data and trace files were uploaded to the Barcode of Life Datasystems (BOLD; www.boldsystems.org) in the Project Halyomorpha halys in eastern Europe and Eurasia (EEUR).
Samples were grouped, based on their country of collection (Georgia, Kazakhstan, Russia, Serbia and Ukraine) and standard measures of diversity were calculated for each group using DnaSP v.5.10.01 (
Samples were grouped, based on their country of collection (Serbia, Ukraine, Russia, Georgia and Kazakhstan) and the proportion of each haplotype within each group (i.e. country) was calculated in order to obtain a representation of the haplotype composition.
Additionally, based on current data and previous publications (e.g.
Genetic diversity measures for H. halys collected in Georgia, Kazakhstan, Serbia, Russia and Ukraine are shown in Table
Country | Number of specimens | Number of Polymorphic sites | Number of haplotypes | Haplotype diversity (h)(mean ± SD) | Nucleotide diversity (π)(mean ± SD) |
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Kazakhstan | 11 | 1 | 2 | 0.327 ± 0.153 | 0.0005 ± 0.00023 |
Georgia | 293 | 0 | 1 | 0 | 0 |
Russia | 202 | 0 | 1 | 0 | 0 |
Serbia | 129 | 9 | 5 | 0.620 ± 0.022 | 0.00163 ± 0.00019 |
Ukraine | 11 | 0 | 1 | 0 | 0 |
All | 646 | 9 | 5 | 0.223 ± 0.021 | 0.00052 ± 0.00007 |
A total of 646 samples were analysed and a 658-bp fragment of the DNA barcoding region of the COI gene was generated (Genbank Accession numbers MZ871818 - MZ872463). Collectively, five COI haplotypes (H1, H3, H8, H33 and H80) were identified. The majority of the samples were identified as haplotype H1 (87.6%), followed by H3 (9.6%), H8 (2.1%), H33 (0.5%) and H80 (0.2%).
The proportion of haplotypes from each country is shown Fig.
Proportion (%) of each COI haplotype from Halyomorpha halys collected in Eastern Europe and Eurasia.
Haplotype | Georgia (n = 293) | Kazakhstan (n = 11) | Serbia (n = 129) | Russia (n = 202) | Ukraine (n = 11) |
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H1 | 100 | 82 | 39.5 | 100 | 100 |
H3 | 0 | 18 | 46.5 | 0 | 0 |
H8 | 0 | 0 | 10.9 | 0 | 0 |
H33 | 0 | 0 | 2.3 | 0 | 0 |
H80 | 0 | 0 | 0.8 | 0 | 0 |
Overview of Halyomorpha halys haplotypes found in Eastern Europe and Central Asia, and their known global distribution in the native Asian range and in the invaded ranges. Countries in bold lettering indicate new records for a given haplotype.
Haplotype | Known distribution within native and invasive ranges | Original haplotype and/or location descriptions | |
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H1 | Native | China |
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Invasive | USA, Canada |
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Switzerland, France, Greece, Hungary |
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Italy |
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Croatia |
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Romania |
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Austria, Serbia, Slovenia, Georgia, Turkey, Chile |
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Kazakhstan, Russia, Ukraine | Present study | ||
H3 | Native | China |
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Invasive | Switzerland |
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France, Hungary, Greece |
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Italy |
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Austria, Serbia, Slovenia, Chile |
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Kazakhstan | Present study | ||
H8 | Native | Unknown | - |
Invasive | Switzerland, France |
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Italy |
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Austria |
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Serbia | Present study | ||
H33 | Native | China |
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Invasive | Greece |
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Italy |
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Serbia | Present study | ||
H80 | Native | China |
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Invasive | Italy |
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Serbia | Present study |
Map of Halyomorpha halys collection locations, with the COI haplotype frequency shown in pie charts sized proportionally to the sample size from each country.
An overview of the number of haplotypes and the dominant haplotypes in non-native countries in Eurasia is presented in Table
Summary of the number of samples analyzed, the number of haplotypes detected, and the proportion of the dominant haplotypes (H1, H3, H33) in the overall haplotype composition in invaded countries in Eurasia.
Country | Reference | Number of samples | Number of haplotypes | Proportion (%) | |||
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H1 | H3 | H33 | Other | ||||
Austria |
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16 | 4 | 25 | 50 | 0 | 12.5 |
Croatia |
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2 | 1 | 100 | 0 | 0 | 0 |
France |
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139 | 3 | 0.6 | 98 | 0 | 1.4 |
Georgia | Present study | 293 | 1 | 100 | 0 | 0 | 0 |
Greece |
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57 | 7 | 32 | 7 | 40 | ≤14 |
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195 | 11 | 32 | 4.1 | 46.2 | 0.5–8.2 | |
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10 | 3 | 20 | 0 | 60 | 20 | |
Hungary |
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84 | 2 | 99 | 1 | 0 | 0 |
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194 | 2 | 99.5 | 0 | 0 | 0.5 | |
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92 | 3 | 93 | 5 | 0 | 2 | |
Kazakhstan | Present study | 11 | 2 | 82 | 18 | 0 | 0 |
Italy |
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42 | 3 | 76 | 21 | 0 | 3 |
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187 | 11 | 60 | 22.5 | 0 | 0.5–3 | |
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212 | 13 | 50 | 12 | 0 | 0.5–15 | |
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162 | 15 | 53 | 15 | 1 | 0.5–10 | |
Romania |
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8 | 1 | 100 | 0 | 0 | 0 |
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23 | 1 | 100 | 0 | 0 | 0 | |
Russia | Present study | 202 | 1 | 100 | 0 | 0 | 0 |
Serbia | Present study | 129 | 5 | 39.5 | 46.5 | 2.3 | 0.8–11 |
Slovenia |
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16 | 3 | 69 | 25 | 0 | 6 |
Switzerland |
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225 | 4 | 0.9 | 85 | 0 | 0.4–14 |
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110 | 4 | 1.8 | 89.5 | 0 | 2.6–6 | |
Turkey |
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11 | 1 | 100 | 0 | 0 | 0 |
Ukraine | Present study | 11 | 1 | 100 | 0 | 0 | 0 |
Trends in the number of cytochrome oxidase I (COI) haplotypes in the invasive range of Halyomorpha halys in Eurasia.
Invasive species typically have reduced genetic variation due to the occurrence of genetic bottlenecks upon colonisation of new locations (
In the present study, the overall haplotype (h = 0.223) and nucleotide diversity (π = 0.00052) of the COI barcode region was relatively low and is consistent with the values mentioned above from previous studies in most European countries (excluding Italy and Greece). However, diversity spanned a broad range, with no diversity in samples from Russia, Ukraine and Georgia (where a single haplotype was found) to haplotype and nucleotide diversity values of 0.62 and 0.00163 (respectively) from samples collected in Serbia (where a total of five haplotypes were found).
The most diverse population in the present study was recorded from Serbia. Although
Based on the present study and the collective dataset available in literature for H. halys (see Table
Greece and Italy are known hotspots of invasive H. halys haplotypes, with 11 (
The first established population of H. halys in the area of eastern Europe and central Asia occurred in Sochi City, Russia in 2013–2014 and at the time the pest was not present in neighbouring countries (see Table
In Kazakhstan, H. halys was first reported in 2016 in Almaty and establishment was confirmed when populations continued to expand in the area in 2017 and 2018 (
The present study focused solely on the COI gene, as this gene has shown reliability in terms of revealing geographic patterning (
The results, presented here, provide haplotype coverage of previously uninvestigated or under-investigated regions along the easternmost front of the invasion of H. halys in Eurasia. The evaluation of H. halys haplotypes along the eastern front of the invasion in Eurasia demonstrates the continued spread and successful establishment of haplotype H1 in newly-invaded areas, where it is often the only haplotype. Secondary invasions within Europe are likely responsible for the movement and spread of additional haplotypes (e.g. H3, H33 and H80) that are moving beyond their first detection and establishment points. In addition, countries at the centre of the invaded range, such as Serbia, are proving to be more diverse due to multiple invasion events from neighbouring countries with differing haplotype compositions.
Several gaps remain to be filled to generate a more complete picture of the haplotype composition across this region. For example, additional collection and haplotype analysis of H. halys is necessary in countries where the pest is known to occur, but where large-scale haplotype analysis has not yet been done. Further, in some locations, more thorough collections are warranted in order to more accurately estimate the haplotype composition and diversity across the entire range of the pest (e.g. Kazakhstan, Ukraine and Croatia). Despite the presence of multiple haplotypes in the invasive Eurasian range, H1 is clearly dominant (Fig.
The analysis of data on invasion pathways into Russia, Georgia and Abkhazia was funded by the Russian Science Foundation (Project # 21-16-00050; https://rscf.ru/project/21-16-00050/) and the development of DNA barcodes for globally-invasive pests was supported by Agriculture and Agri-Food Canada (Project 2955, T.D. Gariepy). We thank colleagues who helped to collect samples: G. Pantiya and L. Kulava (Abkhazia), Dr. P. Esenbekova (Kazakhstan) and others. Monitoring and survey of H. halys in Serbia was partly supported by the Ministry of Agriculture, Forestry and Water Management of the Republic of Serbia and AGRISER d.o.o. Aleksa Santic company. CABI is an international intergovernmental organisation and we gratefully acknowledge the core financial support from our member countries (https://www.cabi.org/about-cabi/who-we-work-with/key-donors/).
Table S1. Collection information and GPS coordinates
Data type: excel table
Explanation note: Details on the collection locations.