Data Paper |
Corresponding author: Fernando Ascensão ( fernandoascensao@gmail.com ) Academic editor: Sandro Bertolino
© 2021 Fernando Ascensão, Marcello D'Amico, Ricardo C. Martins, Rui Rebelo, A. Márcia Barbosa, Joana Bencatel, Rafael Barrientos, Pedro Abellán, José L. Tella, Laura Cardador, José D. Anadón, Martina Carrete, Enrique Murgui, Pedro Fernandes, Sara M. Santos, António Mira, Maria da Luz Mathias, Patrícia Tiago, Eduardo Casabella, Luís Reino, Octávio S. Paulo, Henrique M. Pereira, César Capinha.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Ascensão F, D'Amico M, Martins RC, Rebelo R, Barbosa AM, Bencatel J, Barrientos R, Abellán P, Tella JL, Cardador L, Anadón JD, Carrete M, Murgui E, Fernandes P, Santos SM, Mira A, da Luz Mathias M, Tiago P, Casabella E, Reino L, Paulo OS, Pereira HM, Capinha C (2021) Distribution of alien tetrapods in the Iberian Peninsula. NeoBiota 64: 1-21. https://doi.org/10.3897/neobiota.64.55597
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We present a dataset that assembles occurrence records of alien tetrapods (amphibians, reptiles, birds and mammals) in the Iberian Peninsula, a coherent biogeographically unit where introductions of alien species have occurred for millennia. These data have important potential applications for ecological research and management, including the assessment of invasion risks, formulation of preventive and management plans, and research at the biological community level on alien species. This dataset summarizes inventories and data sources on the taxonomy and distribution of alien tetrapods in the Iberia Peninsula, comprising known locations from published literature, expert knowledge and citizen science platforms. An expert-based assessment process allowed the identification of unreliable records (misclassification or natural dispersion from native range), and the classification of species according to their status of reproduction in the wild. Distributional data was harmonized into a common area unit, the 10 × 10 km Universal Transverse Mercator (UTM) system (n = 6,152 cells). The year of observation and/or year of publication were also assigned to the records. In total, we assembled 35,940 unique distribution records (UTM × species × Year) for 253 species (6 amphibians, 16 reptiles, 218 birds and 13 mammals), spanning between 1912 and 2020. The species with highest number of distribution records were the Mediterranean painted frog Discoglossus pictus (n = 59 UTM), the pond slider Trachemys scripta (n = 471), the common waxbill Estrilda astrild (n = 1,275) and the house mouse Mus musculus (n = 4,043), for amphibians, reptiles, birds and mammals, respectively. Most alien species recorded are native to Africa (33%), followed by South America (21%), Asia (19%), North America (12%) and Oceania (10%). Thirty-six species are classified by IUCN as threatened in their native range, namely 2 Critically Endangered (CR), 6 Endangered (EN), 8 Vulnerable (VU), and 20 species Near Threatened (NT). Species maps are provided in DataSet1, as well R code and GIS layers to update them as new records are obtained.
Alien terrestrial vertebrates, biological invasions, Iberian Peninsula, invasive species, Portugal, Spain
The human-mediated introduction of species into regions outside their native range is an important component of global change. Alien species (sensu
In natural environments, alien tetrapods (amphibians, reptiles, birds and mammals) can compete with, and predate, native species. The American mink (Neovison vison), for example, led to significant population declines of ground nesting birds (e.g. the black-headed gull Chroicocephalus ridibundus or the common tern Sterna hirundo), and small mammals (e.g. the European water vole Arvicola amphibius and the Pyrenean desman Galemys pyrenaicus) in its introduced range (
Here, we provide a first compilation of the distribution of the alien tetrapods in Iberian Peninsula. This region integrates the Mediterranean biodiversity hotspot, harboring about half of the European plant and terrestrial vertebrate species (
Registry of alien tetrapods (terrestrial and freshwater vertebrates) in the Iberian Peninsula.
This dataset summarizes inventories and data sources on the distribution of alien tetrapods in the Iberian Peninsula, from 1912 onwards, comprising known locations from published literature, expert knowledge and citizen science platforms. An expert-based filtering process allowed the identification of unreliable records (e.g., misclassification or natural dispersion from native range). Distributional data was harmonized into a common area unit, the Universal Transverse Mercator (UTM) system (n = 6,152 10 × 10 km cells). The dataset consists of one file, containing a 15 × 159,677 matrix of values, including information on species, location, time, current establishment status and source. In total, we assembled 35,940 unique distribution records (UTM × species × Year) for 253 species (6 amphibians, 16 reptiles, 218 birds and 13 mammals) (Fig.
Yearly distribution of records on non-native tetrapods in the Iberian Peninsula. Year in x-axis refers to the most accurate timeframe information available and may indicate the time of publication (e.g., Spanish Atlas of Mammals in 2007), or the actual time of observation for the data (e.g., from citizen science platforms). Between 1912 and 1980 there are 138 records (<0.1% of total), not shown.
Fernando Ascensão – CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto. Current address: cE3c – Centre for Ecology, Evolution and Environmental Changes, Faculdade de Ciências da Universidade de Lisboa.
César Capinha – CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto. Current address: IGOT – Centro de Estudos Geográficos, Instituto de Geografia e Ordenamento do Território, Universidade de Lisboa, Rua Branca Edmée Marques, 1600-276 Lisboa, Portugal.
This dataset assembles and harmonizes all known locations of alien terrestrial and freshwater vertebrates (tetrapods) in the Iberian Peninsula by UTM cell (ca. 10 × 10 km). The taxonomy and origin are also provided for each species.
The data was collected under the project “The role of transportation in Biological Invasions” funded by Infraestruturas de Portugal Biodiversity Chair (ref02035004). Methodology was developed by Fernando Ascensão and César Capinha. All authors participated in data collection and validation process.
Data was collected from 01/01/2017 to 10/08/2020. Collected data included records from 1912 to 2020.
The primary objective of the present work was to compile a registry of non-native vertebrates (tetrapods) present in the Iberian Peninsula. The applications of these data range from supporting the development of measures for the prevention and management of biological invasions to undertaking species- and community-level ecological research. Specifically, the assembled data allows more detailed research on the distribution of single alien species and of the spatial patterns of richness and composition of alien species assemblages at the regional scale. These potential applications are of specific relevance for a number of species currently being targeted by national and EU-level legislation.
Infraestruturas de Portugal Biodiversity Chair (ref02035004) funded the project “The role of transportation in Biological Invasions”. F. Ascensão was also funded by Fundação para a Ciência e Tecnologia – grant SFRH/BPD/115968/2016.
Summary of “The role of transportation in Biological Invasions” project
The naturalization of non-native species is now one of the main mechanisms responsible for altering the biosphere, causing profound changes in the structure and functioning of ecosystems. Given the increasing mobility of people and goods, concomitant with the increase in road and rail networks, and consequent increase in the number of introductions (intentional or not) of non-native species in new locations, it is expected that these changes will continue worsening sharply in the future. The main objective of this project was to deepen the knowledge about the biogeographic patterns that are emerging as a result of this growing mix of species. Part of the data has been published in
a. Site type
Data was collected for all of the Iberian Peninsula, namely continental areas of Portugal and Spain, together with Gibraltar (a British Overseas Territory located at the southern tip of the Iberian Peninsula).
b. Geography
Continental areas of Portugal and Spain, together with Gibraltar (a British Overseas Territory located at the southern tip of the Iberian Peninsula).
c. Habitat
The region includes terrestrial and freshwater habitats.
d. Geology, landform
The region includes various geological types, ranging from Ediacaran to the Quaternary.
e. Watersheds, hydrology
All river systems in the Iberian Peninsula.
f. Climate
Climatic conditions in the study area range from Mediterranean (most part) to Atlantic (northern region).
a. Design characteristics
Data was obtained following the framework depicted in Fig.
b. Data collection period, frequency, etc.
Basic data collection period was 01/01/2017 to 10/08/2020.
The first step was to identify all tetrapod species occurring in the Iberian Peninsula. We first listed these species by searching in key publications, including national atlases from Portugal (
A collection of experts was gathered (all authors of this study) to discuss the cryptogenic status of some species. This resulted in a list of 406 species potentially occurring in the Iberian Peninsula. After debate among the authors, a few species listed as alien in some data sources were not considered because there was substantial uncertainty about their nativity in the region (Table
Occurrence data was searched in multiple types of sources, including published literature (atlases, research articles, databases), from citizen science data portals and through requests of unpublished data to institutions and experts.
Species for which there was debate among the authors about whether or not they should be considered native, and for which it was finally decided not to consider as such.
Species | Support |
---|---|
Edible frog | Highly difficult to distinguish from Rana perezi, requires genetic data. |
Pelophylax kl. Esculentus | |
Spur-thighed tortoise | Unclear origin ( |
Testudo graeca | |
False smooth Snake | Unclear origin ( |
Macroprotodon cucullatus | |
Egyptian mongoose | Unclear origin ( |
Herpestes ichneumon | |
European mink | Unclear origin ( |
Mustela lutreola |
Published literature: The ISI Web of Science (https://apps.webofknowledge.com) was searched using the search term: “TS = ((list of species names including alternative ones separated by “OR”) AND CU = (Portugal OR Spain)) AND DOCUMENT TYPES: (Article OR Book OR Book Chapter OR Data Paper OR Proceedings Paper OR Review)”. The search was then refined by using the filters RESEARCH AREAS: (ZOOLOGY OR ENVIRONMENTAL SCIENCES ECOLOGY) AND WEB OF SCIENCE CATEGORIES: (ZOOLOGY OR ECOLOGY OR BIODIVERSITY CONSERVATION). The timespan was 2002 (inclusive) onward. We restricted the search to 2002 because previous records are expected to be compiled in the Atlases (see below). The searches were last updated on August 10th, 2020. This resulted in a collection of 767 references, of which 199 articles were identified from their abstracts as potentially containing useable location data. Finally, occurrences of alien species were retrieved from 65 publications (Table
Studies from which locations of alien terrestrial vertebrates were retrieved.
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For Portugal, occurrence data further included information from atlases (Bencatel et al. 2017;
Sources of ‘Inventario Español de Especies Terrestres’ (
Source | Records |
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Base de Datos AHE (2011) | 446 |
|
805 |
Madroño et al. (2004). Libro Rojo de las aves de España. | 660 |
PASER (2008) | 4 |
PASER (2009) | 3 |
PASER (2010) | 1 |
PASER (2011) | 4 |
SACRE (2008) | 18 |
SACRE (2009) | 13 |
SACRE (2010) | 15 |
SACRE (2011) | 40 |
Palomo (2007). Atlas y Libro Rojo de los Mamíferos Terrestres de España. | 12,513 |
SECEM 2009–2013 | 3 |
Citizen science: We further collected information from four different citizen science platforms, including ‘Biodiversity4all’ (
Unpublished data: In addition to the data directly sourced from published literature and online platforms, unpublished occurrence data were obtained through contacts with multiple experts (co-authors).
Data treatment: We considered all records with geographic coordinates and/or Universal Transverse Mercator (UTM) 10 × 10 km identified. All records were standardized into individual 10 × 10 km cells of the Universal Transverse Mercator (UTM) grid system. All data records compiled had coordinates with low (<1 km) coordinate uncertainty.
Accuracy and validity of the occurrence records: The following procedures were carried out for the final version of the database to ensure the accuracy and validity of the occurrence records. For each species, we built a distribution map in the Iberian Peninsula, identifying the UTM cells. These maps were sent to the panel of experts who confronted the mapped data with their own knowledge about the distribution of the species. All species maps were evaluated and validated by the consulted experts. We note that for some species, the data obtained are unlikely to provide a comprehensive representation of their distribution. This is particularly clear for Rattus norvegicus and Mus musculus, which likely have much wider distributions. The scarcity of records for these species should be explained in part by their lower appeal by citizen scientists, thus having fewer records on citizen science platforms than other more iconic species.
Status of establishment: Based on our collective knowledge, we distinguished those species known to reproduce in the wild (established), from those for which there is still no evidence of reproduction (not established), and those for which reproduction is uncertain.
Principal investigators:
Fernando Ascensão – CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto. Current address: cE3c – Centre for Ecology, Evolution and Environmental Changes, Faculdade de Ciências da Universidade de Lisboa.
César Capinha – CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto. Current address: IGOT – Centro de Estudos Geográficos, Instituto de Geografia e Ordenamento do Território, Universidade de Lisboa, Rua Branca Edmée Marques, 1600-276 Lisboa, Portugal.
August 2020.
Metadata are complete.
The data set is available online through the current publication and through Zenodo (DOI: 10.5281/zenodo.4018706). We also provide as Suppl. material
Fernando Ascensão: (current address) Centre for Ecology, Evolution and Environmental Changes Faculdade de Ciências da Universidade de Lisboa Edifício C2, 5° Piso, Sala 2.5.46 Campo Grande 1749-016 Lisboa Portugal. Email: fjascensao@fc.ul.pt.
None.
None.
The dataset consists of 1 file (MS Excel document), named “55597_0R-3-A_Dataset SM-1.csv” (Suppl. material
The size of “55597_0R-3-A_Dataset SM-1.csv” has 20.8 MB.
The file type is MS Excel. No compression scheme was employed.
In the worksheet, a single header row includes the species’ taxonomic classification (i.e., four headers: Class, Order, Family and Species name), common name, the species origin (Africa, Asia, S. America, C. America, N. America, Europe, Oceania), reproduction in the wild (known, not established and uncertain), the IUCN conservation status, and the UTM. Time information is shown in three columns: ‘Year_publication’ refers to the year of publication of Atlases, books, reports and scientific papers. ‘Year’ refers to most accurate time of observation, frequently presented as an interval e.g., ‘2010–2019’ and ‘2002(before)’. The column ‘Year_numeric’ is the most conservative numeric number of Year, in the previous examples would be 2019 and 2002, respectively. The column ‘Source’ indicates the reference from which the information was obtained. Finally, the ‘key’ column indicates the unique ID of citizen science platforms, allowing the online visualization of the records. For example, the key = 58020496 in iNaturalist can be retrieved by the URL: www.inaturalist.org/observations/58020496, showing a common slider.
Alphabetic character fields.
Available online through the current publication.
We provide an R script in Suppl. material
We thank Dr. Cristiane Bastos-Silveira for her help in collecting mammal data from the National Museum of Natural History in Lisbon. FA was funded through a post-doctoral grant from Fundação para a Ciência e Tecnologia (FCT, SFRH/ BPD/115968/2016). RCM work was carried out in the framework of REN Biodiversity Chair, funded by REN (Redes Energéticas Nacionais, S.A.) and FCT. MLM thanks to FCT/MCTES for the financial support to CESAM (UID/AMB/50017/2019), through national funds. Work supported by National Funds through FCT-Fundação para a Ciência e a Tecnologia in the scope of the project UIDB/50027/2020.
Dataset
Data type: table
Maps
Data type: Maps
GIS
Data type: GIS data
R code
Data type: R code